PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027094209.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 590aa MW: 65764.8 Da PI: 4.399

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027094209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.5	7.7e-51	19	145	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLkkk+ ++ +l +vi e+d+yk++P++Lp +k+k+++++w+fFs+rd+ky++g r+nrat++gyWkatgkd+ +++ XP_027094209.1 19 PPGFRFHPTDEELVLYYLKKKMCRRF-HLLDVIGETDVYKWDPEELPglSKLKTGDRQWFFFSPRDRKYPNGARSNRATRRGYWKATGKDRIITC 112 9******************98876.5559************6559999************************************* PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++vg+kktLv+y+grap+g++tdWvmhey+l XP_027094209.1 113 -NARDVGVKKTLVYYQGRAPSGVRTDWVMHEYTL 145 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MKVIEEEISS CFGSGKIFPP GFRFHPTDEE LVLYYLKKKM CRRFHLLDVI GETDVYKWDP 60 EELPGLSKLK TGDRQWFFFS PRDRKYPNGA RSNRATRRGY WKATGKDRII TCNARDVGVK 120 KTLVYYQGRA PSGVRTDWVM HEYTLDEEEL KRCQAVKDYY ALYKVYKKSG PGPKNGEQYG 180 APFKEEEWDD EGGETNGLID HNDQENPVKL VNETAPVSEN GIVSQPQSHL DDFEEFMNGM 240 ANEPVVVPSP AVDYGYSLEE LLCEEEAQSN LVDQSSREVN LHDQSTAVHP ACQEYNVQPS 300 FDLTQSGTSQ LQLHEASEVT SVPQSYASAP HAVEGDFLED FLEMDDLLGP QPTVQAFGKS 360 AVENLQFDEF DGLSELDLYK DAPLFLNEFE TGEQGQIAQP YMNNMGTEVV DPVSSFYFND 420 GLTETINCEQ TYLSNPEEVS FQPWSHDQRS SVFAATEAHQ GTIQPAISGM GYDGNFSDHG 480 SGADQNQSGK QDGTDSWFSS ALWSFVESIP TTPASASESA NRAFERMSSF SRVRINSKNT 540 NVAAGSISAT SSSSVKCKSG FFCFSLLGLL CAILWMLIGT SVKVLGRCIA

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MKVIEEEISS CFGSGKIFPP GFRFHPTDEE LVLYYLKKKM CRRFHLLDVI GETDVYKWDP  60
EELPGLSKLK TGDRQWFFFS PRDRKYPNGA RSNRATRRGY WKATGKDRII TCNARDVGVK  120
KTLVYYQGRA PSGVRTDWVM HEYTLDEEEL KRCQAVKDYY ALYKVYKKSG PGPKNGEQYG  180
APFKEEEWDD EGGETNGLID HNDQENPVKL VNETAPVSEN GIVSQPQSHL DDFEEFMNGM  240
ANEPVVVPSP AVDYGYSLEE LLCEEEAQSN LVDQSSREVN LHDQSTAVHP ACQEYNVQPS  300
FDLTQSGTSQ LQLHEASEVT SVPQSYASAP HAVEGDFLED FLEMDDLLGP QPTVQAFGKS  360
AVENLQFDEF DGLSELDLYK DAPLFLNEFE TGEQGQIAQP YMNNMGTEVV DPVSSFYFND  420
GLTETINCEQ TYLSNPEEVS FQPWSHDQRS SVFAATEAHQ GTIQPAISGM GYDGNFSDHG  480
SGADQNQSGK QDGTDSWFSS ALWSFVESIP TTPASASESA NRAFERMSSF SRVRINSKNT  540
NVAAGSISAT SSSSVKCKSG FFCFSLLGLL CAILWMLIGT SVKVLGRCIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-128	NAC family protein