PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027093956.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | G2-like | ||||||||
Protein Properties | Length: 351aa MW: 38505.2 Da PI: 7.9325 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.2 | 6.9e-32 | 131 | 184 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_027093956.1 131 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 184 9****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 45.6 | 1.6e-14 | 132 | 183 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ XP_027093956.1 132 RMRWTSTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 183 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MRNTGSSFPD LSLQISPPSL RNYDIKEVGY DIGLMVKSSY PSDRSSTTDS GSCGSDLSHE 60 NGGFDPERSL SYPSVDPTLS LGFDMAVSNP LPLQPPRNFQ AYHHYQPQIY GRDFKRNSRM 120 INGLKRSVRA PRMRWTSTLH AHFVHAVQLL GGHERATPKS VLELMNVKDL TLAHVKSHLQ 180 MYRTVKSTDK GAAGPIGQTD LVLSQGTGMA EVESLEAGVE LSCEKAGSNP SANSINISLP 240 SSSPSLPTTL HNAQRPSCEL PPRTNIWCHP SQENSLRCYQ HGDKDTKGAG IDSLHHMSGK 300 MEKKLDSNST NRSMLASSGM LLNLEFTLGR SSWQLDHDAN NTTDLTINLK C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42630.1 | 7e-58 | G2-like family protein |