PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027092759.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 428aa MW: 46145.3 Da PI: 6.3761 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.3 | 3.7e-10 | 271 | 319 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+el+P + +k Ka +L + ++Y++sLq XP_027092759.1 271 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 319 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 428 aa Download sequence |
MSSTENTTGN MGFQESGGGG DSILNCPSSG MDTNSMSDKV AGMAMCSESM FKSSTRVDPF 60 YGGTGWDPLV SLNHAENFGG SSVVPHHNEF GNSHYPVGLE NQAISSTSHL VHYASDSGLG 120 DMVPKLACFG SGAFSEMVNS FGLPDCGQVT ETSFHQKYAQ KMGVGAQEDC QISEERALGG 180 NGKKKRKASD FQSPLNPKKN IEGEQQKDLS ANSSECSKEQ DEMKQKMEQS NSTNLRGKQA 240 SGKQIKDNSN SGEPAKDTYI HVRAKRGQAT NSHSLAERVR RERISERMRL LQELVPGCNK 300 ITGKAVMLDE IINYVQSLQQ QVEFLSMKLA TVNPELNVDL DRIFQKDILH SRGSSAATLG 360 IGPGLNSSHP FPGYPQGSFP GISGAAAPFH PVPQAVWDNE LQSILQMGFD SSPSINNLGP 420 NGRSKLEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 6e-74 | bHLH family protein |