PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027092720.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 318aa    MW: 36740.4 Da    PI: 6.0545
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027092720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.46.6e-5471351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yL++kv++ k++l +vi ++d+y++ePwd++      ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v
  XP_027092720.1   7 VPPGFRFHPTEEELVGYYLNRKVNSLKIDL-DVIVDIDLYRMEPWDIQDrckLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAV 100
                     69****************************.99**************952432234677************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s k++ +g++ktLvfykgrap+g+ktdW+mheyrl
  XP_027092720.1 101 IS-KEKIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 135
                     **.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGYYLNRKVN SLKIDLDVIV DIDLYRMEPW DIQDRCKLGY  60
EEQNEWYFFS HKDRKYPTGT RTNRATAAGF WKATGRDKAV ISKEKIIGMR KTLVFYKGRA  120
PNGRKTDWIM HEYRLQTSEQ GPSQEEGWVV CRAFKKPCPS HKQGFEAWSN AYYIRENGKY  180
QPPSFPDKSI TSMHAVNPIS IHGVDFQQVP LRADHHELIS NHAARFDNQL IEIPQLDSPS  240
ISTSLATKDQ VFESGSLVNE DGEDVKSNIY CQQYNDWKVF DKLLVQQVID PSASYACQNQ  300
PVLLPRDDEL LLGCFTDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-99NAC family protein