PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027091905.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 372aa MW: 41459.7 Da PI: 4.4475 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.8 | 1.2e-10 | 298 | 338 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rrRR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq XP_027091905.1 298 RRRRERINERLRILQNLIPNG-----TKVDISTMLEEAVHYVKFLQ 338 9******************97.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MEPMVAFFDE EWESLSRMFS TEDAEFMIQQ HGHESLSNDS DSSLFFQTAA NFWPVGDANI 60 ENVAGVGESF LCCDNTIDYS NFLNVSQDSS SSNASDTSIV FPNLSYEFHQ ASDINVFQVT 120 NGTPESMDFN AMDEKNDNSS VPVFLDGLVE DIVSPREVMG SENMKNAETQ PASNGSSAIE 180 LLLKRKFQKS ELQTEAEPVE NSKKKSRVPR NVQKTKRTVQ PKSKKNQKAQ QINKDEEEAN 240 AAQNGQSSCS YSSEDDSNAS QESNGGEASD NKGPALNLNG KTRASRGSAT DPQSLYARRR 300 RERINERLRI LQNLIPNGTK VDISTMLEEA VHYVKFLQLQ IKLLSSDDMW MYAPIVYNGL 360 DIGLYGRTFP TL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33880.1 | 8e-46 | bHLH family protein |