PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027091831.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 265aa    MW: 29405.4 Da    PI: 7.2166
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027091831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.43.8e-341771155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_027091831.1 17 KQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 71
                    79****************************************************8 PP
2Myb_DNA-binding63.83.4e-201970148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT e++e++vdav+qlGg+   t+k + r mg +g+t +++ks++qky+
   XP_027091831.1 19 RLRWTNELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 70
                     89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDFMNGGNNN AANLASKQRL RWTNELHERF VDAVAQLGGP DRATPKGVLR VMGVQGLTIY  60
HVKSHLQKYR LAKYLPDSSV DGKKLDKKDA KDMLAGLDGS SGMEITEALK LQMEVQKRLH  120
EQLEVQKQLQ LRIEAQGKYL KKIIEEQQRL NGVLPEGPSA GVTDNCADVE MRTDPGTPPP  180
TSEPPVIDKP AKDHPSTKSL SMDESFSPQE PQTPESGCHM NLFDNIDADR SSKKQRVGLN  240
AAFSKPDMMF TQQLSGLHSV FPTRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-91G2-like family protein