PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027091566.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 590aa MW: 65852.8 Da PI: 4.3663

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027091566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.3	4.4e-51	19	145	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLkkk+ ++++ l +vi e+d+yk++P++Lp +k+k+++++w+fFs+rd+ky++g r+nrat+ gyWkatgkd+ + + XP_027091566.1 19 PPGFRFHPTDEELVLYYLKKKMCRRRHLL-DVIGETDVYKWDPEELPglSKLKTGDRQWFFFSPRDRKYPNGARSNRATRYGYWKATGKDRIIAC 112 9********************999766.9************6559999************************************9 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++vg+kktLv+ykgrap+ge+tdWvmhey+l XP_027091566.1 113 -NARDVGVKKTLVYYKGRAPSGERTDWVMHEYTL 145 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MKVIEEEISS CFGSGKIFPP GFRFHPTDEE LVLYYLKKKM CRRRHLLDVI GETDVYKWDP 60 EELPGLSKLK TGDRQWFFFS PRDRKYPNGA RSNRATRYGY WKATGKDRII ACNARDVGVK 120 KTLVYYKGRA PSGERTDWVM HEYTLDEEEL KRSQAVKDYY ALYKVYKKSG PGPKNGEQYG 180 APFKEEEWDD EGGETNGLID HNDQENPVKL VNETAPVSEN GIVSQPQSHL DDFEEFVNGM 240 ANEPVVVPSP AVDYEYSLEE LLCEEEAQSN LVDQSSWEVN LHDQSTAVHP ACQEYNVQPS 300 FDLTQSGTSQ LQLHEASEVT SAPQSYASAP HAVEGDFLED FLEMDDLLGP QPTVQAFGKS 360 AVENLQFDEF DGLSELDLYK DAPLFLNEFE TGEQGQIAQP YMNNMGTEVV DPVSSFYFND 420 GGTETINCEQ TYLSNPEEVS FQPWSHDQRS SVFAATDAHQ GTIQPAISGM VYDGNFSDHG 480 SGADQNQSGK QDGTDSWFSS ALWSFVESIP TTPASASESA NRAFERMSSF SRVRINSKNM 540 NVAAGSISAT SSSSVKCKSG FFFFSLLGLL CAILWMLIGT SVKVLGRCIA

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MKVIEEEISS CFGSGKIFPP GFRFHPTDEE LVLYYLKKKM CRRRHLLDVI GETDVYKWDP  60
EELPGLSKLK TGDRQWFFFS PRDRKYPNGA RSNRATRYGY WKATGKDRII ACNARDVGVK  120
KTLVYYKGRA PSGERTDWVM HEYTLDEEEL KRSQAVKDYY ALYKVYKKSG PGPKNGEQYG  180
APFKEEEWDD EGGETNGLID HNDQENPVKL VNETAPVSEN GIVSQPQSHL DDFEEFVNGM  240
ANEPVVVPSP AVDYEYSLEE LLCEEEAQSN LVDQSSWEVN LHDQSTAVHP ACQEYNVQPS  300
FDLTQSGTSQ LQLHEASEVT SAPQSYASAP HAVEGDFLED FLEMDDLLGP QPTVQAFGKS  360
AVENLQFDEF DGLSELDLYK DAPLFLNEFE TGEQGQIAQP YMNNMGTEVV DPVSSFYFND  420
GGTETINCEQ TYLSNPEEVS FQPWSHDQRS SVFAATDAHQ GTIQPAISGM VYDGNFSDHG  480
SGADQNQSGK QDGTDSWFSS ALWSFVESIP TTPASASESA NRAFERMSSF SRVRINSKNM  540
NVAAGSISAT SSSSVKCKSG FFFFSLLGLL CAILWMLIGT SVKVLGRCIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-128	NAC family protein