PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027090430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YB | ||||||||
Protein Properties | Length: 250aa MW: 27702.8 Da PI: 6.2784 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 131.2 | 3.5e-41 | 41 | 135 | 2 | 96 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 r+ ++++Pi+n+ rim++ lP na++s++ak t+qecvs++i f+t+ea+++c+re+rkti+++dll+a a+lGf++y+ p+++yl++yr+ e++ XP_027090430.1 41 RDPEHLFPITNIFRIMRRNLPPNARVSEEAKSTIQECVSDYINFITAEANERCRREHRKTITAEDLLYAHANLGFDNYIGPITLYLERYRQNEAA 135 5668899***********************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MAAVLVIREL GDAANDVARN PSSPNVSINN NAQMPMPYPR RDPEHLFPIT NIFRIMRRNL 60 PPNARVSEEA KSTIQECVSD YINFITAEAN ERCRREHRKT ITAEDLLYAH ANLGFDNYIG 120 PITLYLERYR QNEAAQNSVH GDPSVRRTTI FSNVHTQGHP SMLAPTPSPL PPINSTFPIG 180 ADEQAFFNQT PMSNEFYFQN ASGASHGDGF DVVGPSSNAE FPRAFFPHNF HPGPTLPHGS 240 DPHGLGPDGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 4e-43 | NF-YB family protein |