PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027090069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 189aa MW: 21415.9 Da PI: 7.7585 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 82.5 | 8.4e-26 | 25 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p G+rF+Ptdeel+ yL++k+ g + +l + i+++d++ + P++Lp + ++ k+w+f++ ++ t +gyW t + ++++ XP_027090069.1 25 PCGCRFDPTDEELM-VYLRNKIMGGRDDLPDYISTADVFGTSPNQLPfDrCEYSAGKKWFFYTVGQN-------DDVFTGDGYWTPTSE-EAICI 110 89************.8*************999***************63455567889999998655.......456899*******87.66777 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++ g kk +++y g+++ g++t+W +h++rl XP_027090069.1 111 -DGQVDGYKKEFTYYCGTEHPGNRTNWYIHQFRL 143 .799****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MEKPSAASAG GNNDNRGKRA PVEVPCGCRF DPTDEELMVY LRNKIMGGRD DLPDYISTAD 60 VFGTSPNQLP FDRCEYSAGK KWFFYTVGQN DDVFTGDGYW TPTSEEAICI DGQVDGYKKE 120 FTYYCGTEHP GNRTNWYIHQ FRLNPDVYGA SAVGNNLDYK ISSVVACMVF RKEAVVQSNR 180 RKIKRKRKN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 180 | 186 | RRKIKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 1e-18 | NAC family protein |