PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027088509.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 276aa    MW: 31246.5 Da    PI: 8.4298
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027088509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.33.1e-1961442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksg 81 
                     p GfrF+P++eel+ + L  kv+++  e+ +++k+  +y   +ePwd                k +++++ +y F+k +k +  +k++ r+t+ g
  XP_027088509.1   6 PIGFRFRPSEEELI-FLLWLKVTNQLDET-DHVKKKILYgeGAEPWDVLGdddvcwqfyddsgKGASTKRMVYVFTKLKKLS--SKKTARTTSLG 96 
                     89************.88888998888777.6666655552257****96347889988887653333445668888887755..6799******* PP

             NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +W +  k+ +v +  +ge++g +++L +  ++ +kg++  W+mhey +
  XP_027088509.1  97 TWDEETKSYPVEDMiTGEEIGSRRMLSYVLNSGSKGVNGGWIMHEYLV 144
                     ***********99889999***************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MADNIPIGFR FRPSEEELIF LLWLKVTNQL DETDHVKKKI LYGEGAEPWD VLGDDDVCWQ  60
FYDDSGKGAS TKRMVYVFTK LKKLSSKKTA RTTSLGTWDE ETKSYPVEDM ITGEEIGSRR  120
MLSYVLNSGS KGVNGGWIMH EYLVDGASLN GLNSSHNTDY VPCRTIKDDS KYTKVKESRK  180
KGKIAKEKEV GNCVRREVVL GKRKMSLGQE SSQVSKRSCN NPRNPMDKAK SSLITTQAIR  240
HMELPNLVNC EYDGDTRLLQ TYTGLLLDEG VQSMTY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.21e-11NAC family protein