PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027087898.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 293aa MW: 33181.7 Da PI: 8.9341

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027087898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.1	2.1e-33	50	103	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH++Fv+av++LGG+++AtPk++l++m+vkgLt++hvkSHLQ+YR+ XP_027087898.1 50 PRLRWTQDLHQCFVHAVQRLGGEDRATPKAVLQMMNVKGLTVSHVKSHLQMYRS 103 8****************************************************7 PP
2	Myb_DNA-binding	55.4	1.4e-17	51	102	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg+ t+k++ ++m+ kg+t ++ks++q+y+ XP_027087898.1 51 RLRWTQDLHQCFVHAVQRLGGEdraTPKAVLQMMNvKGLTVSHVKSHLQMYR 102 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MSNSPSFQSL DNSADTDKSS VTILEEKMVE IPSRSSVRSR VRPYVRSKLP RLRWTQDLHQ 60 CFVHAVQRLG GEDRATPKAV LQMMNVKGLT VSHVKSHLQM YRSMMQEQTI KEAGVEAGKG 120 NKMQRGIQQP SYFFLHPTGP PQPQYYHYQY KHRLGFGFPN YYMSTPFLYQ NNTPTSITYG 180 AQVYKELLPP TITPGLPNNT WKEMPAAANI EYHRNMFDMQ LPLPIFCNDF LGRIDGQAGV 240 NEKNEQVPDE ASSSSKKMKK IVEGGCSTIF YKEAPGSSAT KDEDDINLEL TLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	5e-26	G2-like family protein