PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027086509.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Dof | ||||||||
Protein Properties | Length: 236aa MW: 26153.7 Da PI: 4.1806 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 66.2 | 5.5e-21 | 1 | 37 | 26 | 62 |
zf-Dof 26 lsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +sqPryfCk+CrryWtkG +lrnvPvGgg+rk ++s+ XP_027086509.1 1 MSQPRYFCKGCRRYWTKGRSLRNVPVGGGCRKTRRSK 37 68*******************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MSQPRYFCKG CRRYWTKGRS LRNVPVGGGC RKTRRSKSAR QADRLGLIYQ MPSPDSASDE 60 SNNSSNGADI DLAAVFTKFL NQDNSSNDLG KIHVSTDQES SSSGASCTSL DLPLGSLDRA 120 NQIENMIFQC QKPPDFIDED QMHEGHPSLS IDVDNVEELL DQNCNAFELQ TILGEEIGED 180 ASLSDGISLP NFEWQSTLQF QDFGSFSTDE AMKIPSNLAD DNWNTFDVSN LAIFFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 1e-22 | Dof family protein |