PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027085913.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 290aa MW: 32899.3 Da PI: 9.3132

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027085913.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.5	3.1e-33	50	103	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH++Fv+av++LGG+++AtPk++l++m+vkgLt++hvkSHLQ+YR+ XP_027085913.1 50 PRLRWTQDLHHCFVHAVQRLGGEDRATPKAVLQMMNVKGLTVSHVKSHLQMYRS 103 8****************************************************7 PP
2	Myb_DNA-binding	54.1	3.6e-17	51	102	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg+ t+k++ ++m+ kg+t ++ks++q+y+ XP_027085913.1 51 RLRWTQDLHHCFVHAVQRLGGEdraTPKAVLQMMNvKGLTVSHVKSHLQMYR 102 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MSNSPSFQSL DNSADTDKSS VTILEEKMVE IPSQSSVRSR VRPYVRSKLP RLRWTQDLHH 60 CFVHAVQRLG GEDRATPKAV LQMMNVKGLT VSHVKSHLQM YRSMMQEQTI KEAGVVAGKG 120 NKTQRGIQQP SYFFLHPTGP PQPQYYHYQY KHRLGFGFPN YYMSTPFLYQ NNTPTSITYG 180 TQVYKELLPT GLPNNTWKEM PAAANIEYHR NMFDMQLSLP IFCNDFLRRI DGQAGVNEKN 240 EQVPDEASSS SKKMKKIVEG GCSTIFYKEA PGSSSATKDE NDINLELTLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	9e-26	G2-like family protein