PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027085838.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 487aa    MW: 53014.6 Da    PI: 5.3794
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027085838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.2e-31250308259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  XP_027085838.1 250 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 308
                     699************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    
MCSRLLQKME NYQGDLADIL RASGGRSIAS SNISSAEVSV SAPRDWQFPS NQVGIYEEPS  60
LDEFGDPFTN MRDPLLLPDM DHMPASGFYD ASSTDHIITS GTTAAAENTG GFSCSDVGGG  120
GGGVGGCNNS SSLLTQRILD DHELSRRPPN NIFTRMLQIS PNAKPPSSPR ESQLLVAASP  180
RGLKPPTLVT NDMINTSNNS KVSVIENAPV QISSPRNTGI KRRKSQAKKV VCIPAPAPAN  240
SRPSGEIVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS RTDPNMLVIT  300
YTSEHNHPWP TQRNALAGST RSQPTKSGST SKATNSSHAQ KATNLKEEEK PETQTDNASS  360
PIVTGSSSTG QVVKEETEME MEVEGLDKKK EMDNLDQFNE GFPQSYKPGL PDSNHSEDFF  420
ADLSELEADP LNLLFTQGYS GDEERENKNL ELFSFYDWTT NNSSMTTTTI MTTTTITSSL  480
EEAKKGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.19e-81WRKY family protein