PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027085396.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 256aa MW: 27941.9 Da PI: 6.5156

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027085396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	54.8	2.1e-17	77	130	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +lkr +r+ +NRe+ArrsR+RK+a ++ Le+ v++L +eN +L k+l +++ XP_027085396.1 77 DLKRIKRMVSNRESARRSRRRKQAHLADLEQQVEQLRGENGSLFKQLGDASQQF 130 69*****************************************97776655554 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MDNPHWSHNL ASRHSSLSAT IDSQSSICVG SPTSATKSKG KDKRAMVATS GSSPEQSDDD 60 EVETEAGQCE ESTDPMDLKR IKRMVSNRES ARRSRRRKQA HLADLEQQVE QLRGENGSLF 120 KQLGDASQQF KDASTNNRVL KSDVEALRAK VKLAEDMVTR GSLTSSLSHL LQNYLSTPES 180 LNNANMCRGE NVSTIVTVRG VDPTYPDVGV SVQNSAARMG NVDNFNGDLK NGVTNDAMIC 240 MADLWPWESH AGSVTK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	99	RRSRRRKQ
2	94	99	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	4e-59	bZIP family protein