PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027085251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 203aa MW: 23206.4 Da PI: 6.2442 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.5 | 1e-31 | 140 | 198 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YYrC+ +gCpvkk+ver++edp++v++tYeg Hnh+ XP_027085251.1 140 LDDGFKWRKYGKKMVKNSPNPRNYYRCSIEGCPVKKRVERDKEDPRYVITTYEGIHNHQ 198 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MNIYQHLTTT ALHFTSLHLS SPIMDGNYDP NRFTNMSGYN YNSSSAFGSS YSSGMISGDT 60 NQSNFQVSEY FELDDWMEED QTFMPSGYST AQSPQQELTE VLGHPGGSSS QQSNRDIGGN 120 ERKENREKVA FKTKSEVEIL DDGFKWRKYG KKMVKNSPNP RNYYRCSIEG CPVKKRVERD 180 KEDPRYVITT YEGIHNHQGP SQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 3e-44 | WRKY family protein |