PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027084334.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 155aa MW: 17546.1 Da PI: 7.9334 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.5 | 4.9e-13 | 40 | 129 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+ +l++ +v+ rl lp + ++e +k ++ ++ g++We + +++++ + + GWk+Fv +n+L+ gD + F+l++ s+++ v+k XP_027084334.1 40 FDVILSRTHVTPPYRLNLPTRMVSELPSK---L-VPMVLTSCGKTWETFY--HGRGRGSTKRFGWKRFVIDNDLRMGDCCFFELMECSTTKIVFK 128 66677888888889999999999888433...2.24667789*****999..78878888999********************997788888887 PP E CS B3 96 v 96 v XP_027084334.1 129 V 129 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MNMTSVANRE RLNFQPGSSS RTAEVDDTEY YTISGTRPYF DVILSRTHVT PPYRLNLPTR 60 MVSELPSKLV PMVLTSCGKT WETFYHGRGR GSTKRFGWKR FVIDNDLRMG DCCFFELMEC 120 STTKIVFKVI ILRGTLPLGE GAGDGDTPET AIFIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 3e-09 | B3 family protein |