PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027084214.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 280aa MW: 31095.2 Da PI: 9.2594

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027084214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105	4.4e-33	41	95	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av++LGG++kAtPk++l++m++kgLtl+h+kSHLQkYRl XP_027084214.1 41 KPRLRWTADLHERFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHLQKYRL 95 79****************************************************8 PP
2	Myb_DNA-binding	68	1.6e-21	43	94	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ XP_027084214.1 43 RLRWTADLHERFVDAVTKLGGPdkaTPKSVLRVMGlKGLTLYHLKSHLQKYR 94 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MERMYGGVGG GGVGGSCYPF ERNGGGGGGG LGGVVMTRDP KPRLRWTADL HERFVDAVTK 60 LGGPDKATPK SVLRVMGLKG LTLYHLKSHL QKYRLGQQAK KQIPAEQSKE NSGDTFGQYN 120 SHASGSISSR VNTEKREIQI SEALKCQIEV QKRLQEQLEV QKKLQMRIEA QGKYLQAILD 180 KAQKSLSLDV NNPCNLEATK AQLSEFNLAL SSFIENVNAE ERNAEIMDKR MLSDMNRKMS 240 EQNYLGLNHE ETHDVKLRLE GASINFDLNT RSSYDFIGTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	2e-70	G2-like family protein