PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027084147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 233aa MW: 25623.5 Da PI: 10.5908 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 224.8 | 7.3e-69 | 65 | 233 | 129 | 301 |
GAGA_bind 129 eeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCY 223 + +++ ++++ ++k++ +++ a +++ k+++kk++++kk+++++++ ++ e+k+ dlv ++ ++D s++P+P CsCtG+ r CY XP_027084147.1 65 LHGPTKNRFVTKPVKIKKNWPPSN--DACPSNKSRPKQPNKKPSTTKKTKRPPKV--GVNIERKNPDLVYDEAKFDFSRVPPPFCSCTGVARACY 155 444445555555555555555553..33334455666777778888788888875..599*********************************** PP GAGA_bind 224 kWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 kWG+G WqS+CC t++S+yPLP+s+ r+gaR+ grKmS+ga++klL + a+eG dls+p+DLk+hWAkHGtnkfvti+ XP_027084147.1 156 KWGSGSWQSSCCNTNLSQYPLPMSPSRPGARVPGRKMSHGAYTKLLCRFATEGCDLSQPIDLKNHWAKHGTNKFVTIK 233 *****************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MVAFSKRCSM ASEVNHTEPP FPQFPGAYPG ASFSCSGFAF HPSQATQMDS KAGIAAVPIR 60 SVPPLHGPTK NRFVTKPVKI KKNWPPSNDA CPSNKSRPKQ PNKKPSTTKK TKRPPKVGVN 120 IERKNPDLVY DEAKFDFSRV PPPFCSCTGV ARACYKWGSG SWQSSCCNTN LSQYPLPMSP 180 SRPGARVPGR KMSHGAYTKL LCRFATEGCD LSQPIDLKNH WAKHGTNKFV TIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35550.3 | 6e-57 | BBR-BPC family protein |