PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027082714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 174aa MW: 19660.2 Da PI: 4.9506 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.7 | 0.00024 | 24 | 60 | 15 | 55 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + N + L llP + + l+ + ++e A++YIk+L+ XP_027082714.1 24 QYNRQLRALSNLLPGS----KAELDEVLVVENATKYIKHLE 60 5688899999999998....788****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MDPSYAKGAS KMLKDRKRQR EEKQYNRQLR ALSNLLPGSK AELDEVLVVE NATKYIKHLE 60 ERVDSLERRL DSTIGEEDEQ SSVVLSEDTK SDSDSDSSLP QILVYISLRD VIISIQCKNH 120 KNIIWETISE VEKQQLSVIS FNTMSFGRAE LVINILAKVF AGPIQGSDDV AHLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22770.1 | 7e-15 | bHLH family protein |