PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027081777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 210aa MW: 23801.3 Da PI: 10.2966 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.4 | 1.6e-10 | 41 | 92 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +r h +Er+RR+++ ++ Lr+l+P ++K s ++ +v+Y++++ XP_027081777.1 41 KRIIHRDVERQRRQEMAALYQSLRSLVPDeY---LQGKRSISDHMHGTVKYVRHM 92 6888*************************77...9******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MARAPNPNSC KPKSCTKKRK SSVAFGDNNV LDNESPVEHK KRIIHRDVER QRRQEMAALY 60 QSLRSLVPDE YLQGKRSISD HMHGTVKYVR HMKRKVDELI SKRDELQELT KPGCSFSILT 120 EFTVSLNKTS VRVQSSTTGM QIILKTTLRG GLPLSKFLSV LNGEGLSVIS CVSTNANEGQ 180 LHVMESEVDQ GRSFDQTKLQ KRLKELLYNL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 12 | 20 | PKSCTKKRK |
2 | 41 | 53 | KRIIHRDVERQRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 2e-35 | bHLH family protein |