PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027081571.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 799aa MW: 90817.2 Da PI: 8.3882 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 26.3 | 2.5e-08 | 32 | 60 | 46 | 88 |
FAR1 46 kktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 + +C+a+l+v+ + +gkw+vtk+++eHnH+ XP_027081571.1 32 D--------------SCEAMLRVEVKGHGKWVVTKFVKEHNHS 60 3..............5**************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 799 aa Download sequence |
MRVNQYGRPR SDGIVAREYL CAKDGLKRRG GDSCEAMLRV EVKGHGKWVV TKFVKEHNHS 60 NTSSGKMHYI RPRRYFAGAL KHNVETYPGL GSVPRGVMYV SVDANRIPAE VNHGKYAPLE 120 LNQSIKNTGP LISTSRYPNQ KRTLGRDAQN LLDYFKKMQA ENPGFYYAIQ LDEDNRMANV 180 FWADARSRTA YSHFGDAVRL DTTYRVNQCK VPFAPFTGVN HHGQTILFAC ALLLDESEAT 240 FLWLFKTFLA AMNDRAPASL VTDQDKAMKA AVAHVFPESR HCINKWDVLR EGQEKMAPVC 300 HMHPNFQMEL YNCINLTQTI EEFESAWDSI LDKYDLKGND WLQLLYNIRR HWVPVYFRDS 360 FFAVISPNQG FESSFFDGYV NQQTTLPMFF RQYERALESS FEKEVEADFD TICTSPVLRT 420 PSPMEKQAAN LYTRRIFTKF QEELVETFVY TANRIDGDGA ISTYRVAKFE DDHKAYIVSL 480 NVPEMKANCS CQMFEYCGIL CRHVLTVFTV TNVLTLPSHY ILKRWTRNAK IGSGSDDRGE 540 LNGHESLTSR YNNLCKEAIR YAEDGAIVPE TYNFVLSALK EVGKKVGVLK KNVAKVAPPS 600 SQVTGVGYDD HGTSTSASDT PLLWPRQDEM IQRFNLNDAS TQSAEVNLPR MAPVSLHRAD 660 NPAENTMVLP CLKSMTWVME NKNSIPANRV AVINLKLQDY SRSPSGESEV KFHLSRITLE 720 PMLRSMAYIS EQLNTPANKV AVINLKLQDT ETTSGESEVK FQVSRDTLGA MLRSMAYIRE 780 QLSSAVEPQQ QIPSKKQRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27110.2 | 0.0 | FAR1 family protein |