PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027080979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 233aa MW: 25736.7 Da PI: 10.6878 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 221.8 | 5.7e-68 | 66 | 233 | 130 | 301 |
GAGA_bind 130 eklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYk 224 + +++ ++++ ++k+ +++ + +++ k++kkk++++kk++++++ ++ e+k+ dlv ++ ++D s++P P CsCtG+ r CYk XP_027080979.1 66 HGPTKNRFVTKPVKIKKDWPPSNDA--CPSNKSRPKQPKKKPSTTKKTKRPPKIG--VNIERKNPDLVYDEAKFDFSRVPQPFCSCTGVARACYK 156 4444555555555555555555333..3334456667777778888888888865..99************************************ PP GAGA_bind 225 WGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 WG+G WqS+CC t++ +yPLP+s+ r+gaR+ grKmS+ga++klL + a+eG dls+p+DLk+hWAkHGtnkfvti+ XP_027080979.1 157 WGSGSWQSSCCNTNLCQYPLPMSPSRPGARVPGRKMSHGAYTKLLCRFATEGRDLSQPIDLKNHWAKHGTNKFVTIK 233 ****************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MVAFSKRCSM ASEVNHTEPP FPQFPGAYPG ASFSSSGFAF HPSQATQMDS KAGIAAVPIR 60 SVPPLHGPTK NRFVTKPVKI KKDWPPSNDA CPSNKSRPKQ PKKKPSTTKK TKRPPKIGVN 120 IERKNPDLVY DEAKFDFSRV PQPFCSCTGV ARACYKWGSG SWQSSCCNTN LCQYPLPMSP 180 SRPGARVPGR KMSHGAYTKL LCRFATEGRD LSQPIDLKNH WAKHGTNKFV TIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35550.3 | 7e-55 | BBR-BPC family protein |