PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027080183.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 324aa MW: 36130.8 Da PI: 8.759

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027080183.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.8	7.3e-56	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +k++++ ++ ++i++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ XP_027080183.1 10 LPPGFRFHPTDEELITYYLINKISDSAFTG-RAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIYNS 103 79***********************999.89***********99999************************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++elvg+kktLvfy+grap+gekt+Wvmheyr+ XP_027080183.1 104 vTSELVGMKKTLVFYRGRAPRGEKTNWVMHEYRI 137 89999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MEGELKEETL PPGFRFHPTD EELITYYLIN KISDSAFTGR AIADVDLNKC EPWDLPGKAK 60 MGEKEWYFFS LRDRKYPTGV RTNRATNTGY WKTTGKDKEI YNSVTSELVG MKKTLVFYRG 120 RAPRGEKTNW VMHEYRIHAK SSYRTAKQDE WVVCRVFQKS AGGKKYPSNH SRAVNPYNLE 180 IGPGALSSQM MQADAFQIPM GRNYMSHAEV QELSRVFRGG SSSMNLQIPA QMNYAAVAGG 240 GGCFTISGLN LNLGGAASTQ PILRAAPPVP STMNQQDVTS SMMTNGVMAN DSGYGAAEIN 300 ANAMSNRFVT MEHCPDLDNY WPTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-119	NAC family protein