PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027078672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 226aa MW: 25658.6 Da PI: 10.8239 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 82.4 | 5e-26 | 26 | 79 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtp LH++F++av++LGG+ AtPk+i+ m+++ +t +h+kSHLQkYRl XP_027078672.1 26 KPRIRWTPGLHNCFIKAVDRLGGPF-ATPKEIMTQMDIPEVTSSHIKSHLQKYRL 79 79*******************9997.****************************8 PP | |||||||
2 | Myb_DNA-binding | 40.1 | 8.5e-13 | 30 | 78 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+ ++ +++av +lGg+ t+k I+ m t ++ks++qky+ XP_027078672.1 30 RWTPGLHNCFIKAVDRLGGPfaTPKEIMTQMDiPEVTSSHIKSHLQKYR 78 9********************************778************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 226 aa Download sequence |
MAAKGNDTKI LHTSDRQLQV AENTRKPRIR WTPGLHNCFI KAVDRLGGPF ATPKEIMTQM 60 DIPEVTSSHI KSHLQKYRLR MGCNSGTAAD STVARKAATN TMFEADDGSN TAGWHTNDIR 120 YIQVQDFQST NSYLKKFVLL TPEASNLCKH KGLNLKGREK FARRRIQTMW GNIKCNVMGT 180 KTSIQAPDIK GEKGKREQKM KMFSIWKDKM GRRSKVIIIS NVHYST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G04030.2 | 8e-18 | G2-like family protein |