PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027077554.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | G2-like | ||||||||
Protein Properties | Length: 483aa MW: 53137.6 Da PI: 7.5402 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.6 | 4.9e-32 | 290 | 343 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_027077554.1 290 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 343 9****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 46.3 | 9.6e-15 | 291 | 342 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_027077554.1 291 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 342 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MPFEQSSKPG PDLSLHISPP CSSSSQICNS IDEINPLSSC FDLDSTRREV QVQKSNTTVQ 60 AYTELSLAHP AANSLTDESH QNHRRHRSFA GGGTHHLHHE DQPQNPYNQT APNISIYQQP 120 NSQQQMNHIN HGVSLLDVSD GLRPIKGIPV YNHNRSFPFL PLDHHTREVK DPKMGFYSMA 180 NYPSWSSSLS QSSSASVVNQ SSSPYFNGGL DHLSILNAAG GPNAAASSAY HRLHQPSGAS 240 SRFNGLGLSS SYQLHHHHNQ YGLGASDASH GMMRSRFLPK LPAKRSMRAP RMRWTSTLHA 300 RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTDKP AASSGQSDGS 360 GDEDLSTIGS GAGGDRSSLR RFIDQRGPSD GSILQQESEY PSTTTTLWSN SSSSREGWMQ 420 STTGDLNGVR HSSSMPLEQR SGHHIEECDS SRPNSYLIPS LERKNPSLEF TLGRPDWVEK 480 ELA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 2e-65 | G2-like family protein |