PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027075921.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 160aa MW: 18520.3 Da PI: 9.3273

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027075921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.7	9.2e-24	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++ Fsvrk++ +k ++g it+r+++C k+g +++ + + e +rtra t+tgC ak+ + + + + k++v++l+leHnHel XP_027075921.1 26 KFYNKYAFKMSFSVRKNYLNKD-KDGVITSRRYTCCKKGVKRKYEGD-EMPKRTRAPTKTGCGAKMIIVLLRgTMKYRVHDLVLEHNHEL 113 6***************9998.8999**********999998.999***********9999888**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MDCSKLTEDK IPELGMEFNS EEDAYKFYNK YAFKMSFSVR KNYLNKDKDG VITSRRYTCC 60 KKGVKRKYEG DEMPKRTRAP TKTGCGAKMI IVLLRGTMKY RVHDLVLEHN HELHIAQCSY 120 VIPSQRKVSE VQGFQPEISK DTGFSLKQSH ELMGKETDFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	5e-16	FAR1 family protein