PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027075750.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

GeBP

Protein Properties

Length: 361aa MW: 41428.1 Da PI: 9.1254

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027075750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	84	2.1e-26	141	238	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskk 94 f r+++e+ ei +LqG+id+++ +++ + s++++a+yef+k++++f+++k+q+ KirrLK+ + k +k + sg++p+f ++ ++ +felskk XP_027075750.1 141 SFARVFTEKNEIDILQGMIDYAKLQNVtDLSAHTNAVYEFLKGKLHFEFTKTQVYGKIRRLKNNYLKILEKrKGSGNDPVFLSPRESISFELSKK 235 689****************88777747788*******************************99885679**************** PP DUF573 95 iWg 97 +Wg XP_027075750.1 236 LWG 238 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MTRKGQTTNA EGDALQGEEI PEEEEDKGEN DRIPQTQHGK EISEAALQGE EIAEEDQEEK 60 ERIPPTQQAA VREVSARPTQ YRPTSGTGSD SEAPQKHSFK RPKRDQKDGA RKNKTMKNVV 120 VIGARNKENQ KKTSVHPTTS SFARVFTEKN EIDILQGMID YAKLQNVTDL SAHTNAVYEF 180 LKGKLHFEFT KTQVYGKIRR LKNNYLKILE KRKGSGNDPV FLSPRESISF ELSKKLWGGV 240 DFVDDVKSGM KKKKDGKKAM VRKLQLKHDD EVNVEEDQGG FKPNHPFLEE SSDEKNLELL 300 WMPESLKVFM RGNMTLIDCE KAKELEVKWK ELRRKEIELF LMKLNLRMEL INHVLDAMKK 360 G

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MTRKGQTTNA EGDALQGEEI PEEEEDKGEN DRIPQTQHGK EISEAALQGE EIAEEDQEEK  60
ERIPPTQQAA VREVSARPTQ YRPTSGTGSD SEAPQKHSFK RPKRDQKDGA RKNKTMKNVV  120
VIGARNKENQ KKTSVHPTTS SFARVFTEKN EIDILQGMID YAKLQNVTDL SAHTNAVYEF  180
LKGKLHFEFT KTQVYGKIRR LKNNYLKILE KRKGSGNDPV FLSPRESISF ELSKKLWGGV  240
DFVDDVKSGM KKKKDGKKAM VRKLQLKHDD EVNVEEDQGG FKPNHPFLEE SSDEKNLELL  300
WMPESLKVFM RGNMTLIDCE KAKELEVKWK ELRRKEIELF LMKLNLRMEL INHVLDAMKK  360
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	6e-17	GeBP family protein