PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027074079.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 196aa    MW: 21595.1 Da    PI: 6.1656
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027074079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016118140123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+C k+Fs+   L  H r H
  XP_027074079.1 118 HECPICFKVFSTGQALGGHKRAH 140
                     79**************9999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MDQEDIQLMD PNPCKKVEFN AHAPELEICS SDRADTADEI FKISEKKREY RCRACNMSFS  60
SHRALGGHSN KHKINGHCSA SGTESSHLTD IECNGTSAEA GSDGVAMADL QLTKTKDHEC  120
PICFKVFSTG QALGGHKRAH YAGFSESRIK EMTAANQELR DIQNVFDLNL PVITHPGARD  180
DGISLKAWYE PLVISN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.14e-21C2H2 family protein