PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027073949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 29660.7 Da PI: 8.326 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.6 | 1.5e-05 | 54 | 86 | 1 | 34 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...T CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskap 34 +r + erE++ Rd++N f eLr+ + +a + XP_027073949.1 54 KRIHKAEREKKKRDHMNVLFVELRKAIEPAQ-LS 86 688899*********************9973.23 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MRFPDIYAIV IQNPSDCYLS ARMWNLLTSF LWIFLETICI RHSSSKKKQG KPSKRIHKAE 60 REKKKRDHMN VLFVELRKAI EPAQLSSGKA CIVNDTIRLL KDLLAQVYSL KKDNAALLSE 120 SHYVAVEKNE LIEENSALKS QVEKLQSEIT ERTQSQSSVN LNIWPSQSPI AASELQEDSL 180 RLPSTDHQLL SSSVVAPIFV VPLHHDSPIY HKGSQNDTAE DFQCNASLSN VKKPRPRYPS 240 PSDSWPSQIL DEQLNGREIT Q |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 46 | 66 | KKKQGKPSKRIHKAEREKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 2e-36 | bHLH family protein |