PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027073760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 288aa MW: 32954.9 Da PI: 9.682 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54 | 3e-17 | 28 | 118 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv+ +s++l++p f++++ g++ k ++l+ +g+ W+v + + +++++++++GW+ F++ + Lk g+f+vF++dg+s f +v XP_027073760.1 28 FFKVF--LPDVSSQQLRVPPLFVKKFsGLV---CKRIKLRCIDGKIWDVDV--EETQEGVFMKNGWQAFADHHLLKLGEFLVFRYDGNSVF--TV 113 78888..44555566***********7777...357***************..**********************************9***..** PP EEE-S CS B3 95 kvfrk 99 k+fr+ XP_027073760.1 114 KIFRT 118 **996 PP | |||||||
2 | B3 | 41.4 | 2.6e-13 | 203 | 287 | 10 | 98 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ + l+l+k f++++++k + ++l +e+ ++W vk+++ + ++ +++GW F k+ng++egD + + +d+ +++ +++v++ XP_027073760.1 203 RTQMHKLMLSKGFISKNNIK--LGSNVMLCNEKEEKWPVKFTHFRDGR-ACIGTGWMAFWKDNGMCEGDKFKLVFDE-GRGRKMITVCK 287 556688***********877..5568***************8766664.56899***************97777664.66666888875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 288 aa Download sequence |
MVKPGRGRPR KDSSSSSYLS FMDARPEFFK VFLPDVSSQQ LRVPPLFVKK FSGLVCKRIK 60 LRCIDGKIWD VDVEETQEGV FMKNGWQAFA DHHLLKLGEF LVFRYDGNSV FTVKIFRTHG 120 CKEEAFVREK IAADVKIEPL EDQIAATEHT CAKHSCNSDG EGNKLDTSRG VREGKQQMSS 180 RFHSQTVQTE RDSEFGSIRS ISRTQMHKLM LSKGFISKNN IKLGSNVMLC NEKEEKWPVK 240 FTHFRDGRAC IGTGWMAFWK DNGMCEGDKF KLVFDEGRGR KMITVCKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66980.1 | 2e-27 | B3 family protein |