PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027073760.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 288aa    MW: 32954.9 Da    PI: 9.682
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027073760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3543e-1728118199
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ffkv+      +s++l++p  f++++ g++    k ++l+  +g+ W+v +  + +++++++++GW+ F++ + Lk g+f+vF++dg+s f  +v
  XP_027073760.1  28 FFKVF--LPDVSSQQLRVPPLFVKKFsGLV---CKRIKLRCIDGKIWDVDV--EETQEGVFMKNGWQAFADHHLLKLGEFLVFRYDGNSVF--TV 113
                     78888..44555566***********7777...357***************..**********************************9***..** PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     k+fr+
  XP_027073760.1 114 KIFRT 118
                     **996 PP

2B341.42.6e-132032871098
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      ++ + l+l+k f++++++k   +  ++l +e+ ++W vk+++ + ++   +++GW  F k+ng++egD + + +d+  +++ +++v++
  XP_027073760.1 203 RTQMHKLMLSKGFISKNNIK--LGSNVMLCNEKEEKWPVKFTHFRDGR-ACIGTGWMAFWKDNGMCEGDKFKLVFDE-GRGRKMITVCK 287
                     556688***********877..5568***************8766664.56899***************97777664.66666888875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MVKPGRGRPR KDSSSSSYLS FMDARPEFFK VFLPDVSSQQ LRVPPLFVKK FSGLVCKRIK  60
LRCIDGKIWD VDVEETQEGV FMKNGWQAFA DHHLLKLGEF LVFRYDGNSV FTVKIFRTHG  120
CKEEAFVREK IAADVKIEPL EDQIAATEHT CAKHSCNSDG EGNKLDTSRG VREGKQQMSS  180
RFHSQTVQTE RDSEFGSIRS ISRTQMHKLM LSKGFISKNN IKLGSNVMLC NEKEEKWPVK  240
FTHFRDGRAC IGTGWMAFWK DNGMCEGDKF KLVFDEGRGR KMITVCKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-27B3 family protein