PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027073229.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 351aa MW: 39580.6 Da PI: 6.1207

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027073229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.4	4e-55	16	140	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+++yL +kv + ++++ +i evd++kvePwdLp ++k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ XP_027073229.1 16 LPPGFRFHPSDEELITHYLSPKVLDYSFSA-IAIGEVDLNKVEPWDLPWRAKLGEKEWYFFCVRDRKYPTGMRTNRATDAGYWKATGKDKEIFK- 108 79***********************999.88***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 ++lvg+kktLvfykgrapkgekt+Wvmheyr XP_027073229.1 109 VKKLVGMKKTLVFYKGRAPKGEKTNWVMHEYR 140 899**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MENVSAVTDD DEKMELPPGF RFHPSDEELI THYLSPKVLD YSFSAIAIGE VDLNKVEPWD 60 LPWRAKLGEK EWYFFCVRDR KYPTGMRTNR ATDAGYWKAT GKDKEIFKVK KLVGMKKTLV 120 FYKGRAPKGE KTNWVMHEYR PEGKNSIHGA SRAEKNEWVI CRIFKKSSEG KKIHISGLTR 180 ATNCRDDSSS SELPPLMDLS SDEAQTRTTV AEASNVTRFS NPMEVEDQKP QYADLIKTPY 240 ATSASNISAF SPASLISPKF STPNSILAAQ IMPHMDHLHY TDSVFMQDQS ILKLLFDDYE 300 SNGNAKSEVS QSTGGISTDM SSSLSDFRPF GYLECPITSA GPVDLECLWN Y

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MENVSAVTDD DEKMELPPGF RFHPSDEELI THYLSPKVLD YSFSAIAIGE VDLNKVEPWD  60
LPWRAKLGEK EWYFFCVRDR KYPTGMRTNR ATDAGYWKAT GKDKEIFKVK KLVGMKKTLV  120
FYKGRAPKGE KTNWVMHEYR PEGKNSIHGA SRAEKNEWVI CRIFKKSSEG KKIHISGLTR  180
ATNCRDDSSS SELPPLMDLS SDEAQTRTTV AEASNVTRFS NPMEVEDQKP QYADLIKTPY  240
ATSASNISAF SPASLISPKF STPNSILAAQ IMPHMDHLHY TDSVFMQDQS ILKLLFDDYE  300
SNGNAKSEVS QSTGGISTDM SSSLSDFRPF GYLECPITSA GPVDLECLWN Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-118	NAC family protein