PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027071403.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 171aa    MW: 19266.2 Da    PI: 6.5957
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027071403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000192648123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C  C++ F++   L  H++ H
  XP_027071403.1 26 YECVFCKRGFNTAQALGGHMNIH 48
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MGSNNIQEVD LAPPEEDNSL GMGRSYECVF CKRGFNTAQA LGGHMNIHRK DRARNKPATS  60
TNSSKHEEDY TVPRLSYQQM NPSHQPYYIA PHETTQFNYS RSCFPASGLA AQPNFANHHY  120
SAQRFNPFGV DHWSMSFGLP CSSSAHVEDF EKARRIGGQE DELDLELRLG P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-14C2H2 family protein