PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027071176.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 783aa MW: 84140.9 Da PI: 6.7043

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027071176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.8	1e-12	311	372	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++ +r r+++NRe+A+ sRqRKk ++eeLe+kvk++ + ++L ++ e a+l+++ XP_027071176.1 311 EEDERRRARLIRNRESAQLSRQRKKHYVEELEDKVKNMHSTIQDLNAKITYFMAENATLRQQ 372 56678899*****************************************9999999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
MAETVVVDPP PPPERLPNGG VSGGHDFNGL AIPPLDHTFL SQDITLGDAN GQSFDPFDQN 60 GNDDVVFDDF DFDLDFSFDD LLPAGAGAPL PDPDQFDSDC FVLHGSDPNL SQIPPDRSLK 120 NVARAFKTTS AEFAHVSGEN CVSGEGLISN RSLSLEPEVC QVSSDQVSGD RSSGMNLSSS 180 GDRGHDVSGY LNVPSPESNG SKGSNDSRDC PSPESQGSGN NCRSNVSEDS NRSVSSSSNF 240 GNNSVKNGVV DQKIKFEEFN CKVNNKSLLK RKKEGEDVNN VESRTNKFQK SSVNLASNAE 300 NSNSNNNILS EEDERRRARL IRNRESAQLS RQRKKHYVEE LEDKVKNMHS TIQDLNAKIT 360 YFMAENATLR QQLGGGGVAP PPMAPPPPGV YPPMMYPWMP CGVPPYMMKP QGSQVPLVPI 420 PRLKSQQPAP APKGNKKADS KKTEGKTKKV ASVSFLGLLC FVLLFGGLAP MVNVRYGGVR 480 EAFSGGTDYI ENQFYEKHHG RVLTASGNLT DSDYGGKFGG GKDYNEKGNK LNGTEPLVAS 540 LFVPRNDKLV KIDGNLIIHS VLASEKAMAS RKDAASEVGG ETRLVPVSGG RPAHLYRSST 600 DRQRALGSGS VGSDNLKSPA ADGRLQQWFR EGLAGPMLSS GMCTEVFQFD VSSASGPGAI 660 VPATSARNVT EKQSRNSTDL NKGRNRRILR GVPIPLPGSS HNISEDVGRT SKKENFSGNN 720 LLSPMVVSVL VDPREVGDAD VDGVMGAKSL SRIFVVVLID SVKYVTYSCM LPFKGAGPHL 780 VTT

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

MAETVVVDPP PPPERLPNGG VSGGHDFNGL AIPPLDHTFL SQDITLGDAN GQSFDPFDQN  60
GNDDVVFDDF DFDLDFSFDD LLPAGAGAPL PDPDQFDSDC FVLHGSDPNL SQIPPDRSLK  120
NVARAFKTTS AEFAHVSGEN CVSGEGLISN RSLSLEPEVC QVSSDQVSGD RSSGMNLSSS  180
GDRGHDVSGY LNVPSPESNG SKGSNDSRDC PSPESQGSGN NCRSNVSEDS NRSVSSSSNF  240
GNNSVKNGVV DQKIKFEEFN CKVNNKSLLK RKKEGEDVNN VESRTNKFQK SSVNLASNAE  300
NSNSNNNILS EEDERRRARL IRNRESAQLS RQRKKHYVEE LEDKVKNMHS TIQDLNAKIT  360
YFMAENATLR QQLGGGGVAP PPMAPPPPGV YPPMMYPWMP CGVPPYMMKP QGSQVPLVPI  420
PRLKSQQPAP APKGNKKADS KKTEGKTKKV ASVSFLGLLC FVLLFGGLAP MVNVRYGGVR  480
EAFSGGTDYI ENQFYEKHHG RVLTASGNLT DSDYGGKFGG GKDYNEKGNK LNGTEPLVAS  540
LFVPRNDKLV KIDGNLIIHS VLASEKAMAS RKDAASEVGG ETRLVPVSGG RPAHLYRSST  600
DRQRALGSGS VGSDNLKSPA ADGRLQQWFR EGLAGPMLSS GMCTEVFQFD VSSASGPGAI  660
VPATSARNVT EKQSRNSTDL NKGRNRRILR GVPIPLPGSS HNISEDVGRT SKKENFSGNN  720
LLSPMVVSVL VDPREVGDAD VDGVMGAKSL SRIFVVVLID SVKYVTYSCM LPFKGAGPHL  780
VTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	515	521	GGKFGGG
2	675	687	RNSTDLNKGRNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-143	bZIP family protein