PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027070113.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family SBP
Protein Properties Length: 359aa    MW: 39765.3 Da    PI: 8.7412
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027070113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.81.1e-41111188178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +CqvegC+ dl+ ak+yhrrh++Ce hsk+p+v+v+g+e+rfCqqCsrfh+lsefD++krsCrrrL++hn+rrr++q+
  XP_027070113.1 111 RCQVEGCNLDLTAAKDYHRRHRICESHSKSPKVIVAGVERRFCQQCSRFHNLSEFDDKKRSCRRRLSDHNARRRRPQP 188
                     6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MEFELTKYPA SMHSQDSAMD GGKATELDRD YFGTVNSWPN ENRKEEDFIG VEKGESYSAP  60
AASLGFDQPV VGLKLGMPKD SKHLSSITNS SLSSNSGKRS RASHQGMQTS RCQVEGCNLD  120
LTAAKDYHRR HRICESHSKS PKVIVAGVER RFCQQCSRFH NLSEFDDKKR SCRRRLSDHN  180
ARRRRPQPDA MHLSSMGLPS SLYGRRAPSF LLSRMPSSSS NRTWECSSGL KMANAGNSLI  240
RASGVDVSPG HAQSHLNESQ NLPCALSLLS TPSWALHEPE SASLEQLMQG SVSIPQPASQ  300
LESQNWHLIS EARVSAEQAP SVTPFHSMAL QNTDNSHLPG YRSFKPPYDS GFHFTSRIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168185KKRSCRRRLSDHNARRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.11e-45SBP family protein