PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027069782.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NF-YB

Protein Properties

Length: 189aa MW: 20590.2 Da PI: 7.4133

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027069782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	187.8	7.7e-59	29	126	1	98
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrflPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy++plkvyl++yre+eg XP_027069782.1 29 VREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLTRYREMEG 123 69********************************************************************************************* PP NF-YB 96 ekk 98 ++k XP_027069782.1 124 DTK 126 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MADSSQGGTP ASPGGGSHES GDQSPRSGVR EQDRFLPIAN ISRIMKKALP ANGKIAKDAK 60 ETVQECVSEF ISFITSEASD KCQREKRKTI NGDDLLWAMA TLGFEDYIDP LKVYLTRYRE 120 MEGDTKGSAK GADGPAKRDG VQLGPSPQLA HQGSFSQGMN YGSSQMGITI QFFSPVKFSQ 180 DKWIMFVLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	1e-83	NF-YB family protein