PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027069326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 194aa MW: 22166.6 Da PI: 7.1984 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51 | 3.4e-16 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l+ av lG ++W + a+ g++R++ +c++rw +yl XP_027069326.1 15 KGPWLEEEDERLIAAVSILGERRWGSLAKASGLRRSGRSCRLRWMNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.5 | 6.6e-18 | 71 | 113 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T+eE+ l+v+++kq+G++ W++Iar ++ gRt++++k++w+++l XP_027069326.1 71 ITEEEEHLIVQLHKQWGNR-WSRIARSLP-GRTDNEIKNYWRTHL 113 59*****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MDHYQVAMQE AEMRKGPWLE EEDERLIAAV SILGERRWGS LAKASGLRRS GRSCRLRWMN 60 YLRPNLKHGH ITEEEEHLIV QLHKQWGNRW SRIARSLPGR TDNEIKNYWR THLRKKALIL 120 EEESSASNSR QSVTTTASTA ATTNNSEQNS PLGICEAFSS LHSNNGDWDS EKDDYNLRTC 180 GDLSGEVEKL SSLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 4e-44 | MYB family protein |