PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027068513.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 146aa MW: 16992.4 Da PI: 8.1289 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63.9 | 4.5e-20 | 11 | 98 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+Y ++ Fsvrk++ +k ++g +t r++ C keg +++ + + + +rt+a t+tgC ak+ + + + + + +v++l+leHnHel XP_027068513.1 11 KFYNKYTFKMDFSVRKDYLNKD-KDGVTTFRRYSCCKEGVKRKYEGD-VMPKRTQAPTKTGCGAKMIIVLFRgTMQCRVHDLVLEHNHEL 98 6*****************9998.8899****************9999.9999*****************99989***************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MEFNSEEDAY KFYNKYTFKM DFSVRKDYLN KDKDGVTTFR RYSCCKEGVK RKYEGDVMPK 60 RTQAPTKTGC GAKMIIVLFR GTMQCRVHDL VLEHNHELHI AQCSHMLTSQ RKVSEAQGLQ 120 TEISEDAWFS LKQSHELMEK EACGMG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 9e-11 | FAR1 family protein |