PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027067083.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 723aa MW: 78177.3 Da PI: 7.4234

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027067083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28	3.8e-09	418	455	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_027067083.1 418 FEHflHPYPKDSDKLMLAKQTGLTRSQVSNWFINARVR 455 554459******************************88 PP
2	BELL	118.7	2.8e-38	282	353	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe++ag+gsak Yt+lAl++iS++FrcLkdai +qi XP_027067083.1 282 ERQEIQMKKAKLVNMLDEVEQRYRQYHNQMQIVISWFEQAAGIGSAKTYTALALQTISKQFRCLKDAILGQI 353 79********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MATYFHGNSE IQGGGGDHGL QTLILMNHAG YVGGYSDTHQ PPPHVQVQVQ PPSNFVFLNS 60 SNTPGPSAAP GANSLNVHHA PPPPSPTQQF VGIPLTATAA TSSQDHQPHA ASVQDISALH 120 AFLPRLQYNL YSPAMDLGAA REVSRAQQGL SLSLSSQQPA YGSFRPEREI PSQPLVTAIS 180 PTGGDDLRVS GGSSSSASGI SNGVNGMQSV LLSSKYLKAA QELLDEVVNV GKGVKSGVAT 240 AKGANGQAKE IGESSEMTAT AGEGQNGREN SAKRSAELTT AERQEIQMKK AKLVNMLDEV 300 EQRYRQYHNQ MQIVISWFEQ AAGIGSAKTY TALALQTISK QFRCLKDAIL GQIRAASKSL 360 GEEDSFGGKI EGSRLKFVDN QLRQQRALQQ LGMIQHNAWR PQRGLPERSV SVLRAWLFEH 420 FLHPYPKDSD KLMLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYTEEMK EHEKNGSEVK 480 TSKSEQNEDS GSKSNALQEK SSSLEIQNKG FISKQDHLAN QNVTSPISMS PTASPPGIHI 540 QNQSGFNLIG SPEMDSITQG SPKKLRSADM LHSPSSVPSV SIDAKPNESN NEQLSMKFVN 600 ERQNREGFSL LGAPTNFIGG FGSYPIAEIG RFSSEQFPGP YSGNGVSLTL GLPHCENLSI 660 SGPHQNFLPN QNIQLGRGVE IGEANDYGGL GTPTSSHSTS VYENINIQNR KRFAAQLLPD 720 FVA

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MATYFHGNSE IQGGGGDHGL QTLILMNHAG YVGGYSDTHQ PPPHVQVQVQ PPSNFVFLNS  60
SNTPGPSAAP GANSLNVHHA PPPPSPTQQF VGIPLTATAA TSSQDHQPHA ASVQDISALH  120
AFLPRLQYNL YSPAMDLGAA REVSRAQQGL SLSLSSQQPA YGSFRPEREI PSQPLVTAIS  180
PTGGDDLRVS GGSSSSASGI SNGVNGMQSV LLSSKYLKAA QELLDEVVNV GKGVKSGVAT  240
AKGANGQAKE IGESSEMTAT AGEGQNGREN SAKRSAELTT AERQEIQMKK AKLVNMLDEV  300
EQRYRQYHNQ MQIVISWFEQ AAGIGSAKTY TALALQTISK QFRCLKDAIL GQIRAASKSL  360
GEEDSFGGKI EGSRLKFVDN QLRQQRALQQ LGMIQHNAWR PQRGLPERSV SVLRAWLFEH  420
FLHPYPKDSD KLMLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYTEEMK EHEKNGSEVK  480
TSKSEQNEDS GSKSNALQEK SSSLEIQNKG FISKQDHLAN QNVTSPISMS PTASPPGIHI  540
QNQSGFNLIG SPEMDSITQG SPKKLRSADM LHSPSSVPSV SIDAKPNESN NEQLSMKFVN  600
ERQNREGFSL LGAPTNFIGG FGSYPIAEIG RFSSEQFPGP YSGNGVSLTL GLPHCENLSI  660
SGPHQNFLPN QNIQLGRGVE IGEANDYGGL GTPTSSHSTS VYENINIQNR KRFAAQLLPD  720
FVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-143	TALE family protein