PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027066333.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 267aa    MW: 29809.5 Da    PI: 7.9747
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027066333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.1e-054466123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_027066333.1 44 YTCSFCRREFKSAQALGGHMNVH 66
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MISVHMYFSI ITESQLVCES WEEQAFAEDA AGGLGGCTWP PRSYTCSFCR REFKSAQALG  60
GHMNVHRRDR ARLKQSPTPH MEVLSRNHQI LNPCASLDSP QICTFLYSHD SNDSDHRVVL  120
ASPSSPIRVS SSSPPPKIMD CEEKILGAPQ FFSTIVDESY QKSNLSSPQS WSNLVADKYF  180
HVPDSKNGDK GSKTVKSNGR ANGEHVKADL SASLNLLLCR TRSNTSDDAE NFHTYKRRKM  240
DETSVTLLPT STLADKNVFF SQICRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.11e-27C2H2 family protein