PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027065569.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 326aa    MW: 35004.1 Da    PI: 5.5054
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027065569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552.1e-1785135155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  XP_027065569.1  85 PVYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFACPEMAARAHDVAALSIKG 135
                     68*****998.**********854...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MADPPHSETE SSSHSGTLDS AHMHHHRKRG RDDNNTTTTT TTTSAASRSN DDNDTHRSSK  60
NSNIRSQTGN NSNNNNNNNS SSKHPVYRGV RMRAWGKWVS EIREPKKKSR IWLGTFACPE  120
MAARAHDVAA LSIKGNSAIL NFPELAGSLP RPATSSPPDV QAAALKAAQM DFEMDGRAKP  180
GDESSHSQSS SSSSSRVMTP CLSSMTSSSC SSSLLSSVTS SSPSSCTEEV STAAQESEAA  240
AAEELCEIVE LPSLGASYDS VESAREELVF MDSVDNMGWD YGHPWLHGSV ETYGYFGENH  300
AGLMGMAEVD NPVVSGSFEG LLWQLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-47ERF family protein