PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027065531.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 318aa    MW: 35332.4 Da    PI: 9.7661
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027065531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.73.7e-19182215134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C+ C+ttkTplWR+gp g+k+LCnaCG+++rk +
  XP_027065531.1 182 CADCNTTKTPLWRSGPKGPKSLCNACGIRQRKAR 215
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MIPNYLTSAS PSPFSVRDPI QDHDEHDRPQ FFFPNYQTAS SSSVSSSGFR SIALDQTEDY  60
HAQMHQQRYQ QQVENHAPYT GSQDPEKKAN KGSKISLWKN NTNGNQADDH EEINPVNNKW  120
VSSKVKLMQK MNKPDLKEIT SSTTTTMKFE DHQKQPTSAS PEADHFSSNS SSNISNTPIR  180
VCADCNTTKT PLWRSGPKGP KSLCNACGIR QRKARRAMAA AAAAANGTSP PTYDTTAPLK  240
VKVQNKDKLK NNGQFKKRCK LNTSAESSQN LHAVQKKSGF EDFLFTLSKN LAFHRVFPQD  300
EKEAAILLMA LSCGLVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.15e-37GATA family protein