PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027064896.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 691aa MW: 80006 Da PI: 6.549 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 80.1 | 4e-25 | 70 | 161 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g i++r+fvC+++g+++++kk+++++ r r++ r+gC+ak+ ++ke +++w+v+++++ HnHel XP_027064896.1 70 EYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKMYLTKEVvngQAQWYVSQFSNVHNHELL 161 69********************8888.*******************************************98888999*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 691 aa Download sequence |
MAVKTLNNIW IRRQQCPCGD WKCYIKYEGD DQPTVGLHSM KNETTISSSN EVVFTPYVGQ 60 IFRSDDEAFE YYSNFARKNG FSIRKARSTE SQNLGIYRRD FVCYRSGFNQ PRKKANVEHP 120 RDRKSVRCGC DAKMYLTKEV VNGQAQWYVS QFSNVHNHEL LEDDQVRLLP AYRKIQEADQ 180 ERILLLSKAG FPVNRILKVL ELEKGVQPGQ LPFIEKDVRN FVRTCKKTVQ ENDAMLSEKR 240 ENDLQELLEA CKAMAQKNDG FVYNYSTEEN GKVENIAWAY GDSVRAFSVF GDVVTFDTTY 300 RSITYNLLLG IWFGISNHGR AIFLGCALLQ DETSQSFSWA LQVFIQFMRG GQPQTILTDI 360 DSGLRDSIAM EMPNTKHIIC VWQVLSKLSS WFSLSLGSQY AEFRPRFDML CHLENVEDFE 420 HQWNHVVGQF GLGSDKHIAL LFSYRTSWPF CYTRNFFLAR SLTSEYLKSV ESFLKNILSM 480 QTCLQSFFEQ VGIAASFGYQ NQDEMLYLPM KTGLPLEEHA RSILTPYAFN VAQNEIMLSM 540 QYSLTEMANG SYLVRHYKKM ERECLVFWMP EDEQVHCSCK EFEHSGILCR HSLRVLIVKN 600 YFQIPEKYFP IRWQLQSSLV PLDDQIIESR GNELSEAFHS LTSSLFCEAS ISKERYNHVH 660 RVLTELLEHV QSMPVMSEVA LNLAPNNTSE P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |