PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027063196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 147aa MW: 16964.4 Da PI: 8.5877 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.1 | 3.4e-19 | 70 | 146 | 1 | 78 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwev 78 +fY++YAk GF +r sk +k k+++ + +r f+Cs+egkr ++k++ + +r+etr++C a++k++ ++ gk++v XP_027063196.1 70 NFYQKYAKASGFGTRLSKGHKDKNSDMMLDRVFCCSREGKRPKDKHN-MVVKCPRPETRCDCGARMKISCRQAGKYRV 146 6******************************************9999.9999************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MENDLPTHEI QSYRKLDFED VDWQEINDNA LPLYITDGNQ GNQIFLPLAI PDDLVRKLGM 60 EFVTEVAARN FYQKYAKASG FGTRLSKGHK DKNSDMMLDR VFCCSREGKR PKDKHNMVVK 120 CPRPETRCDC GARMKISCRQ AGKYRVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 9e-13 | FAR1 family protein |