PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027063080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 25013.2 Da PI: 6.683 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.3 | 4.8e-07 | 12 | 44 | 2 | 33 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C... CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.aska 33 +++ ++ E++RRd++++ +++L +llP+ +sk+ XP_027063080.1 12 KTKRKITEKNRRDQMKNLYNTLYRLLPSnNSKG 44 567899**********************55422 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
METFHASASN TKTKRKITEK NRRDQMKNLY NTLYRLLPSN NSKGFCPVPD KIEDAIYHIK 60 SMEKKLGDYQ EIKKKLLHGK RPRSSASSES NNSSTLTDVE VQDIGPDANM ILISGLEEQA 120 SFYGIIRRLH AEGFEVVTAN FSNTGTSTLQ VVHEKVSSQV GASTSGSETT AVSKRLKELI 180 YGYPQGEVES KLDLLDFEIV PDLLTPDFFG PFATENFCFL QQY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 25 | EKNRRDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 5e-14 | bHLH family protein |