PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027062467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 494aa MW: 53872.6 Da PI: 4.9837 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.1 | 2.6e-15 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed ll ++v++ G g+W+++ r g+ R++k+c++rw ++l XP_027062467.1 29 KGPWTANEDALLMEYVRKNGEGNWNAVQRNSGLMRCGKSCRLRWSNHL 76 79*******************************************996 PP | |||||||
2 | Myb_DNA-binding | 49.1 | 1.4e-15 | 82 | 125 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T++E+ l+v++++++G++ W++ a+ ++ gRt++++k++w++ XP_027062467.1 82 KGAFTQDEEALIVNLHAKFGNK-WARMASQLP-GRTDNEIKNYWNT 125 799*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 494 aa Download sequence |
MAPDRSPSRK SSAASTSRSG GSLRHIMKKG PWTANEDALL MEYVRKNGEG NWNAVQRNSG 60 LMRCGKSCRL RWSNHLRPNL KKGAFTQDEE ALIVNLHAKF GNKWARMASQ LPGRTDNEIK 120 NYWNTRLKRR QRAGLPLYPV DIQPLNQYQP QNLQPSPSLV SFITAVDGKP KHSTPISIFD 180 MFNPTTPPAS TSQNQPLPSF LSDPSPNFKP AHNKNGIALS LSSVNSLLSL TSASLAFNNQ 240 GPSPLGASLP MPSLQFNCLN FGIANTVPVS HASFAQNDTG SGSNMGLPAI QSLVPETTSS 300 GSDYMIATSS DADDRDEGHD HQGLSHGNSG LLEDVIDESQ ALTRAEKPKE TCLNAEKSQG 360 EFLWDYKLME DVGGNVGEES DLNAILDEPY KDSTPTHSSI GVETTNASSQ KSNPVEDDLF 420 NLLDDIPLPV TMPDWYDGNG NDIDGQCSNW IEGDAGKENH QPEPSYSPVA TTPEITDNNW 480 TDGASYWKNL PGIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.2 | 5e-68 | MYB family protein |