PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027061234.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

ERF

Protein Properties

Length: 493aa MW: 55294.8 Da PI: 5.7193

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027061234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60	5.7e-19	249	299	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge XP_027061234.1 249 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 299 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MNIFVSMASP KNSGKSKKYV EESQHLAGKE WDRDRRGQGI REFDLSLERQ QQWRPVFDEA 60 SMENRPFKKI KSPERQDPFH QSSSSLAQQT SQPPLSLTPP YDSRGSNPLA FPSPSPSSSS 120 SRHVFPFAFD GTQQSLESLQ HLRAHTFDRN QQNTVPLFRP LQQNEQQMIS FAPHYHHHQQ 180 QQQQGFAFPP YFAGDVAAGS QHQQQQLLQY WSDALSPRGR MMMMNRLGQG QEPRTLFRPP 240 IQPINTTKLY RGVRQRHWGK WVAEIRLPRN RTRLWLGTFD TAEDAALAYD REAFKLRGEN 300 ARLNFPELFL GKEKAESSSV AGPDSSASDP PTPHDNSASR SGDQPQQPDQ APEGLNMDVY 360 IPELPAAALM GDNPDDDSGL GSSEVTASDE VPAFAESSSA AAEGALHPQS SELVWGEMAD 420 AWFNSIPAGW GPGSPVWDDL DSSNNLMLPP DLPFVNLHQQ SSHDSDSQRQ LDNAASSSST 480 SYPVRPFFWK DRE

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MNIFVSMASP KNSGKSKKYV EESQHLAGKE WDRDRRGQGI REFDLSLERQ QQWRPVFDEA  60
SMENRPFKKI KSPERQDPFH QSSSSLAQQT SQPPLSLTPP YDSRGSNPLA FPSPSPSSSS  120
SRHVFPFAFD GTQQSLESLQ HLRAHTFDRN QQNTVPLFRP LQQNEQQMIS FAPHYHHHQQ  180
QQQQGFAFPP YFAGDVAAGS QHQQQQLLQY WSDALSPRGR MMMMNRLGQG QEPRTLFRPP  240
IQPINTTKLY RGVRQRHWGK WVAEIRLPRN RTRLWLGTFD TAEDAALAYD REAFKLRGEN  300
ARLNFPELFL GKEKAESSSV AGPDSSASDP PTPHDNSASR SGDQPQQPDQ APEGLNMDVY  360
IPELPAAALM GDNPDDDSGL GSSEVTASDE VPAFAESSSA AAEGALHPQS SELVWGEMAD  420
AWFNSIPAGW GPGSPVWDDL DSSNNLMLPP DLPFVNLHQQ SSHDSDSQRQ LDNAASSSST  480
SYPVRPFFWK DRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	2e-47	ERF family protein