PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.4_1s0079.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

bZIP

Protein Properties

Length: 417aa MW: 45106.3 Da PI: 6.6516

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.4_1s0079.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	62.6	7.7e-20	262	317	1	56
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++e+kr+rrkq+NRe+ArrsR+RK+ae+e+L+e+v Le+eN +Lk e+ +++ Bobra.4_1s0079.1.p 262 DREVKRQRRKQSNRESARRSRLRKQAECEQLAERVTLLEQENARLKAENVAFRDKL 317 5899******************************************9997777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MYHTGQRGTE IFSVYGYPRF WSAHMYDGCP PGKLGKQELR QVDDILPPRW TRCSFMEGDH 60 PGPREGNLPV PAGAPTLHNV SGSSAPGVHP YPNIMAYNVF SSKGAPASPA FYANAVPPAY 120 PGIYVAPQPA VMYSPHPFYP GMVPFPGAFP AHIPAQDAEE KKPEERKQTV ADARAVSGNS 180 SSDDSQLGKE RGPPKRTKQS QGPTQTRHPE MLPPAGRYSL GSDSVSGGND AGLATAAGNN 240 GQDMWRHRNT QFAPGADVGQ DDREVKRQRR KQSNRESARR SRLRKQAECE QLAERVTLLE 300 QENARLKAEN VAFRDKLISL GVDLTVKEKD GCANQDAQDH VEDLKVAVEG GLPAKLLDGV 360 ADPQGREPAS GGDFLLQELE QVKEDLDPLK KVAILSLDGS PEKGGVNHAE HTDAPC*

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MYHTGQRGTE IFSVYGYPRF WSAHMYDGCP PGKLGKQELR QVDDILPPRW TRCSFMEGDH  60
PGPREGNLPV PAGAPTLHNV SGSSAPGVHP YPNIMAYNVF SSKGAPASPA FYANAVPPAY  120
PGIYVAPQPA VMYSPHPFYP GMVPFPGAFP AHIPAQDAEE KKPEERKQTV ADARAVSGNS  180
SSDDSQLGKE RGPPKRTKQS QGPTQTRHPE MLPPAGRYSL GSDSVSGGND AGLATAAGNN  240
GQDMWRHRNT QFAPGADVGQ DDREVKRQRR KQSNRESARR SRLRKQAECE QLAERVTLLE  300
QENARLKAEN VAFRDKLISL GVDLTVKEKD GCANQDAQDH VEDLKVAVEG GLPAKLLDGV  360
ADPQGREPAS GGDFLLQELE QVKEDLDPLK KVAILSLDGS PEKGGVNHAE HTDAPC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	285	RRSRLRK
2	279	286	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	2e-19	bZIP family protein