PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Bobra.180_1s0022.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 237aa MW: 26351.3 Da PI: 10.2808 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.4 | 1.1e-11 | 108 | 165 | 2 | 59 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +e +r+rr+ +NRe+ArrsR+RK++ + Lee + + ++e + +++ +l+ke++k Bobra.180_1s0022.1.p 108 AEYRRARRMLSNRESARRSRKRKQEHLMSLEEQMHKVQEEKQHVDDRVAKLEKEIEKR 165 5789***************************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MPRVPSLDLL RQLVAHQNTS ANPAQNLPCS TAEAHEDDVS SSKLEALTST SAPPPQIVAT 60 VPVVAPVALS NSLVPKAVAM PTHPLAVHHS QATSGSDIVI DKEKMSKAEY RRARRMLSNR 120 ESARRSRKRK QEHLMSLEEQ MHKVQEEKQH VDDRVAKLEK EIEKRDAENR KLKEEILYLK 180 EQLIKAGDGD YALKVREAVR KGPRSDLPKR VPLNGRHEKM VKREAKLAIA AELVGA* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 124 | 130 | RRSRKRK |
2 | 124 | 131 | RRSRKRKQ |
3 | 126 | 131 | SRKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G30530.1 | 3e-11 | bZIP family protein |