PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0274s0010.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C3H
Protein Properties Length: 480aa    MW: 51787 Da    PI: 6.7347
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0274s0010.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH215.7e-07118139426
                          ---SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                            C++f++ G+C++G+ C++aHg
  Bobra.0274s0010.1.p 118 TACPHFRK-GQCQFGNACPCAHG 139
                          67******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MEVANPLSPL SLEQTEAMLN FPGRHTPTEG DNAELELALE EASAEAALSG EVGPDTGVST  60
EPRELSRPEY KSDDFRMFRL KIELCSNPNP HCYTDCPFSH PNEKARRRDP TKIQYDATAC  120
PHFRKGQCQF GNACPCAHGV FELWLHPSKY KTELCSRPRE AGKECEHPTC FFAHHESEQR  180
RVSSVVSPTG PPLMSPSGSV QSSPSDREDI LNNNEVMAAA LHKAAATLVQ QQRSASISAS  240
PFADPNRLGS LPFDDFNARS FITGGPPLLT QRSPSMDAAP SFRRPMQFST GYNNAPRHLS  300
DAVAMSRAPS APVIPRHVLS QQLGGSLPPL DLQHGRSLEP SINRALLQKS HAAYTHTPLP  360
THMAPGPAPA WMSSSGGASL PHNMDLARLL GQMTISNAMQ KGLSGHLDPS MVNNYSSLAG  420
PTPNSLHGLA VSSSDLQGLH ASGLASPLDR FVSSSFLSDT LDPTMHLQAG PQAYYLNHN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25900.21e-35C3H family protein